PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA11g14600
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family C2H2
Protein Properties Length: 524aa    MW: 58821.9 Da    PI: 5.7989
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA11g14600genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2120.000667699123
                EEETTTTEEESSHHHHHHHHHH.T CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirt.H 23
                + C  Cgk Fs+   L  H+++ H
  CA11g14600 76 HICCECGKEFSSGKALGGHMSSaH 99
                68******************9988 PP

2zf-C2H213.70.00019154173221
                 EETTTTEEESSHHHHHHHHH CS
     zf-C2H2   2 kCpdCgksFsrksnLkrHir 21 
                  C  Cgk F++k +L  H+r
  CA11g14600 154 ICDLCGKDFPSKKSLFGHMR 173
                 5******************8 PP

3zf-C2H214.20.00013382404123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 y+C++Cgk F ++  L  H ++H
  CA11g14600 382 YTCKICGKIFASHQALGGHRSSH 404
                 9***************9999998 PP

4zf-C2H215.16.8e-05465487123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 +kC++C+k F++   L  H+r+H
  CA11g14600 465 HKCEICDKIFPTGQALGGHQRSH 487
                 79*******************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.6476104IPR007087Zinc finger, C2H2
SMARTSM003550.387699IPR015880Zinc finger, C2H2-like
PfamPF139121.5E-77699IPR007087Zinc finger, C2H2
PROSITE patternPS0002807899IPR007087Zinc finger, C2H2
SMARTSM003550.0023153175IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.159153180IPR007087Zinc finger, C2H2
SuperFamilySSF576679.0E-10154175No hitNo description
PfamPF139124.1E-7154177IPR007087Zinc finger, C2H2
PROSITE patternPS000280155175IPR007087Zinc finger, C2H2
SuperFamilySSF576679.0E-10377404No hitNo description
PROSITE profilePS5015710.949382409IPR007087Zinc finger, C2H2
SMARTSM003550.015382404IPR015880Zinc finger, C2H2-like
PfamPF139124.9E-7382405IPR007087Zinc finger, C2H2
PROSITE patternPS000280384404IPR007087Zinc finger, C2H2
SuperFamilySSF576676.16E-6462491No hitNo description
PfamPF139121.4E-9464488IPR007087Zinc finger, C2H2
PROSITE profilePS501579.743465492IPR007087Zinc finger, C2H2
SMARTSM003550.015465487IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280467487IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 524 aa     Download sequence    Send to blast
MEAQDDQENN GSSENGPSSS SSNTFKVKIK IPIRKLVKDE EKIKVDADGD EDLCKEDENK  60
VREEKIDFFA KLKKEHICCE CGKEFSSGKA LGGHMSSAHV QANQRLEELR KWKKNFSQEK  120
SSKLMKRFDD NDDDEDEDDF GDGVFDNHEM MKIICDLCGK DFPSKKSLFG HMRCHPDRDW  180
RGMKPPSGSK KSAKNGGFRA SFNDFDDDGD DANDRFDVLR DEEEEERSID VNVAALSPPP  240
LRIDLKDCVK SWGVTDRRGR SPLTKKRSVS GTCPDEEGVH LAAQQLLSLI NGDNNNNNHN  300
SEVICSSNSV SSAPKEASLS DLKDKPKRKA AVDDTEGAHC GETCSDSPVH KKRRREKVLV  360
KLEPGKDPVP SPVIKKTPDV KYTCKICGKI FASHQALGGH RSSHNKFKIT IENTIDHHQD  420
QEIKARNQED INTQVHAHQD VQLGNQEINN YNIIDQHGSN NNNAHKCEIC DKIFPTGQAL  480
GGHQRSHWTN NQEESSGQNP SKVLDFDLNE LPELPDLDDD YYR*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016546163.10.0PREDICTED: uncharacterized protein LOC107846241
TrEMBLQ6L4C01e-162Q6L4C0_SOLDE; Putative zinc finger protein, identical
STRINGPGSC0003DMT4000848051e-147(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA20502263
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56200.17e-17C2H2 family protein